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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs34333207 chr2:28993330 G/GA 0.000113 489 15.32 18.13 14.98 KM Plot
THCA rs34344571 chr2:241516094 G/C 1.58E-11 486 15.93 14.73 19.27 KM Plot
THCA rs34351896 chr4:157383093 A/C 0.000152 489 16.05 15.93 15.17 KM Plot
THCA rs34378309 chr4:110748545 T/A 5.85E-5 490 15.9 16.02 15.3 KM Plot
THCA rs34384719 chr16:20565815 G/A 1.36E-6 478 15.9 17.55 14.27 KM Plot
THCA rs34390075 chr1:91821254 T/G 7.73E-6 490 15.67 17 17.77 KM Plot
THCA rs34397533 chr10:7864451 G/GA 6.24E-6 486 16.02 16.05 15.5 KM Plot
THCA rs34400115 chr16:20857698 C/A 3.42E-5 488 16.37 14.7 17.65 KM Plot
THCA rs34404125 chr6:153331369 A/T 4.31E-5 490 15.17 17.83 10.45 KM Plot
THCA rs34446016 chr1:22458637 T/TG 1.53E-9 479 15.68 17.83 9.47 KM Plot
THCA rs34474617 chr11:4119688 TA/T 4.5E-5 488 19.05 13.88 16.38 KM Plot
THCA rs34509812 chr3:14571752 A/G 5.39E-5 490 16.37 14.97 15.33 KM Plot
THCA rs34525765 chr19:53675832 C/G 2.99E-6 474 16.2 16.65 11.73 KM Plot
THCA rs34546088 chr11:112031798 C/CA 3.32E-5 487 16.13 16.3 12.37 KM Plot
THCA rs34547062 chr14:36065300 G/C 5.12E-6 489 15.93 16.37 8.33 KM Plot